BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B02LP1|AL425802
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 1569 0.0
>3x_Contig1674
Length = 12281
Score = 1569 bits (791), Expect = 0.0
Identities = 799/801 (99%), Gaps = 1/801 (0%)
Strand = Plus / Minus
Query: 1 tctcaaggaattactattgcaaagtactgaaatgttgctatacactccttctaacgaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6255 tctcaaggaattactattgcaaagtactgaaatgttgctatacactccttctaacgaaca 6196
Query: 61 ctttggaattgtaccactcgaggctatgaagtatggtgtacctgttttggcagtagatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6195 ctttggaattgtaccactcgaggctatgaagtatggtgtacctgttttggcagtagatac 6136
Query: 121 gggtggtccactagaaacagtggtagattacaatgagacaccttctcatattgatgcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6135 gggtggtccactagaaacagtggtagattacaatgagacaccttctcatattgatgcaac 6076
Query: 181 tggttggttacgaccatccgatgctgatgaatggtcaaaagtgttggatcaatccgtaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6075 tggttggttacgaccatccgatgctgatgaatggtcaaaagtgttggatcaatccgtaga 6016
Query: 241 catatttgaaaagaatcactccttattcgaagttaacggtcctaaacgtattaagtacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6015 catatttgaaaagaatcactccttattcgaagttaacggtcctaaacgtattaagtacta 5956
Query: 301 tttctccagagaagcgatgtccaaaaactttgataataccatcgaccatattatttggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5955 tttctccagagaagcgatgtccaaaaactttgataataccatcgaccatattatttggaa 5896
Query: 361 gtcaagaggaacgcgtttatggagcacattagctccagggctactgatgttcactgtcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5895 gtcaagaggaacgcgtttatggagcacattagctccagggctactgatgttcactgtcca 5836
Query: 421 atatgctacactgttgataacaggcgatgcttcttggccatatttattgctagctgcgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835 atatgctacactgttgataacaggcgatgcttcttggccatatttattgctagctgcgat 5776
Query: 481 ttcttattttgtattaagaagtgtaaaggccactgtgtactggatcatcgttttctgtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5775 ttcttattttgtattaagaagtgtaaaggccactgtgtactggatcatcgttttctgtta 5716
Query: 541 cctaaactattcaacttaaaagcgaa-scaatcttaatttattataacgacttgtgcaaa 599
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5715 cctaaactattcaacttaaaagcgaagccaatcttaatttattataacgacttgtgcaaa 5656
Query: 600 atatatacacatacccctcaaagttaagagatgaaaaacagacgttaacaagctattaag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5655 atatatacacatacccctcaaagttaagagatgaaaaacagacgttaacaagctattaag 5596
Query: 660 tttctaaatattacactaattaactcttcctccatatccatttacaccaaattgaacacc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5595 tttctaaatattacactaattaactcttcctccatatccatttacaccaaattgaacacc 5536
Query: 720 aggttgatttgaattgcttcgactttgagtattaaccggtgagcctattgtttgctgcat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5535 aggttgatttgaattgcttcgactttgagtattaaccggtgagcctattgtttgctgcat 5476
Query: 780 caacttagaagccgtatctag 800
|||||||||||||||||||||
Sbjct: 5475 caacttagaagccgtatctag 5455
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5737
Number of Sequences: 1807
Number of extensions: 5737
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)